draw.graph {HapVLMC}R Documentation

Draw Graph.

Description

Provide a graphical representation of (part of) a haplotype VLMC graph. Does not show case-control status. Area of node circles is proportional to node count, edges have differing patterns depending on allele.

Usage

drawgraph(mygraph, start.draw=1, end.draw=mygraph$D+1, labels = 1:mygraph$D)

Arguments

mygraph A VLMC graph created with make.graph.
start.draw Level at which to start drawing graph. Defaults to Level 1.
end.draw Level at which to end drawing graph. Defaults to Level D+1 (final level).
labels Labels for the x-axis of the graph, one per marker.

Author(s)

Sharon Browning

References

S. Browning 2006 "Multilocus association mapping using variable length Markov chains".

See Also

make.graph.


[Package HapVLMC version 2.0 Index]