alter.case {HapVLMC}R Documentation

Alter Case-control Status.

Description

Add or change case-control status of a haplotype VLMC graph. Useful for permutation testing.

Usage

alter.case(mygraph, is.case)

Arguments

mygraph A VLMC graph, such as that created by make.graph.
is.case A vector of true/false values, one per row in the haplotype array (mygraph$haplos).

Value

A VLMC graph with the same structure as mygraph, but new case-control status.

Author(s)

Sharon Browning

References

S. Browning 2006 "Multilocus association mapping using variable length Markov chains".

See Also

make.graph, graph.edge.test.


[Package HapVLMC version 2.0 Index]